BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G06SP1|AL429624
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig658 1651 0.0
>3x_Contig658
Length = 2378
Score = 1651 bits (823), Expect = 0.0
Identities = 853/874 (97%)
Strand = Plus / Plus
Query: 1 aacanctttatcatttataaaggaatataggcataatacgtaacacatgtttcgattaag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aacatctttatcatttataaaggaatataggcataatacgtaacacatgtttcgattaag 494
Query: 61 gattcaaactccaaacacattttgtatgtcagggttacgtcagtgaattcagatttatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gattcaaactccaaacacattttgtatgtcagggttacgtcagtgaattcagatttatca 554
Query: 121 atagtatagttcattaaaatctctaagagaattattatttcttcttcttcttcttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atagtatagttcattaaaatctctaagagaattattatttcttcttcttcttcttctttt 614
Query: 181 attttcatttcatccatgttgttcatttatgaataaaagaaaacatgagacaatcgttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 attttcatttcatccatgttgttcatttatgaataaaagaaaacatgagacaatcgttac 674
Query: 241 aggacattagttaattattatgggattaaagttttcaatagtagttggagttgagatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aggacattagttaattattatgggattaaagttttcaatagtagttggagttgagatggg 734
Query: 301 attgaattccagtaactctggctctttcttgatatttcatcttttatttttctcttgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 attgaattccagtaactctggctctttcttgatatttcatcttttatttttctcttgttt 794
Query: 361 ttttttttttttttttggkagcttttaacttttattccacytcycyggatgattccctca 420
|||||||||||||||||| ||||||||||||||||||||| || | |||||||||| |||
Sbjct: 795 ttttttttttttttttggtagcttttaacttttattccacttctctggatgattccttca 854
Query: 421 ttggggggtttacaagtattagtttaahacatcagkgggcycattgaatgtaacgcatta 480
||||||| ||||||||||||||||||| ||||||| |||| |||||||||||||||||||
Sbjct: 855 ttgggggttttacaagtattagtttaatacatcagtgggctcattgaatgtaacgcatta 914
Query: 481 atcattcacygagaawatcyctaccaaacawaccycycttcaaccaatccatgaataaaa 540
||||||||| ||||| ||| |||||||||| ||| | |||||||||||||||||||||||
Sbjct: 915 atcattcactgagaatatctctaccaaacatacctctcttcaaccaatccatgaataaaa 974
Query: 541 ggactcttgttctccaagaaacggkttgggcaaaggaaatggrtccccacaaatacatag 600
|||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||
Sbjct: 975 ggactcttgttctccaagaaacggtttgggcaaagtaaatggatctccacaaatacatag 1034
Query: 601 caatcaaaccaccaacgaaagagtaaccaggcaagtcaaacacggcagagttaccgatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 caatcaaaccaccaacgaaagagtaaccaggcaagtcaaacacggcagagttaccgatgt 1094
Query: 661 aggctaaggaacctagatggacgtatctgaaaggtctataaaccttttcatcgataccct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aggctaaggaacctagatggacgtatctgaaaggtctataaaccttttcatcgataccct 1154
Query: 721 tttcgtggattccttggatgctgtccttattggcagatctagcaaccttagtcaatttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 tttcgtggattccttggatgctgtccttattggcagatctagcaaccttagtcaatttct 1214
Query: 781 tacccaagtatttaccttgttgatgagctctttgagctgttgctggtaaagaggkaacct 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1215 tacccaagtatttaccttgttgatgagctctttgagctgttgctggtaaagaggtaacct 1274
Query: 841 tagtctcaacttcacgtaacaaggtagagatttg 874
||||||||||||||||||||||||||||||||||
Sbjct: 1275 tagtctcaacttcacgtaacaaggtagagatttg 1308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,372
Number of Sequences: 1807
Number of extensions: 22372
Number of successful extensions: 5676
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)